- M (MDAnalysis.analysis.dielectric.DielectricConstant.results attribute)
- m (MDAnalysis.topology.tpr.obj.Atom attribute)
- M2 (MDAnalysis.analysis.dielectric.DielectricConstant.results attribute)
- major_pair() (in module MDAnalysis.analysis.nuclinfo)
- MajorPairDist (class in MDAnalysis.analysis.nucleicacids)
- make_density() (MDAnalysis.analysis.density.Density method)
- make_downshift_arrays() (in module MDAnalysis.core.topology)
- make_whole() (in module MDAnalysis.lib.mdamath)
- mass_density (MDAnalysis.analysis.lineardensity.LinearDensity.results.x attribute)
- mass_density_stddev (MDAnalysis.analysis.lineardensity.LinearDensity.results.x attribute)
- Masses (class in MDAnalysis.core.topologyattrs)
- masses (in module MDAnalysis.topology.tables)
- matrix() (MDAnalysis.lib.transformations.Arcball method)
- matrix_id (MDAnalysis.analysis.psa.PSAPair attribute)
- MAX_CHEMFILES_VERSION (in module MDAnalysis.coordinates.chemfiles)
- mB (MDAnalysis.topology.tpr.obj.Atom attribute)
-
MDAnalysis.analysis.align
-
MDAnalysis.analysis.atomicdistances
-
MDAnalysis.analysis.base
-
MDAnalysis.analysis.bat
-
MDAnalysis.analysis.contacts
-
MDAnalysis.analysis.data.filenames
-
MDAnalysis.analysis.density
-
MDAnalysis.analysis.dielectric
-
MDAnalysis.analysis.diffusionmap
-
MDAnalysis.analysis.dihedrals
-
MDAnalysis.analysis.distances
-
MDAnalysis.analysis.encore.bootstrap
-
MDAnalysis.analysis.encore.clustering.affinityprop
-
MDAnalysis.analysis.encore.clustering.cluster
-
MDAnalysis.analysis.encore.clustering.ClusterCollection
-
MDAnalysis.analysis.encore.clustering.ClusteringMethod
-
MDAnalysis.analysis.encore.confdistmatrix
-
MDAnalysis.analysis.encore.covariance
-
MDAnalysis.analysis.encore.dimensionality_reduction.DimensionalityReductionMethod
-
MDAnalysis.analysis.encore.dimensionality_reduction.reduce_dimensionality
-
MDAnalysis.analysis.encore.dimensionality_reduction.stochasticproxembed
-
MDAnalysis.analysis.encore.similarity
-
MDAnalysis.analysis.encore.utils
-
MDAnalysis.analysis.gnm
-
MDAnalysis.analysis.hbonds.hbond_autocorrel
-
MDAnalysis.analysis.helix_analysis
-
MDAnalysis.analysis.hole2
-
MDAnalysis.analysis.hole2.templates
-
MDAnalysis.analysis.hole2.utils
-
MDAnalysis.analysis.hydrogenbonds.hbond_analysis
-
MDAnalysis.analysis.hydrogenbonds.hbond_autocorrel
-
MDAnalysis.analysis.hydrogenbonds.wbridge_analysis
-
MDAnalysis.analysis.leaflet
-
MDAnalysis.analysis.legacy.x3dna
-
MDAnalysis.analysis.lineardensity
-
MDAnalysis.analysis.msd
-
MDAnalysis.analysis.nucleicacids
-
MDAnalysis.analysis.nuclinfo
-
MDAnalysis.analysis.pca
-
MDAnalysis.analysis.polymer
-
MDAnalysis.analysis.psa
-
MDAnalysis.analysis.rdf
-
MDAnalysis.analysis.rms
-
MDAnalysis.analysis.waterdynamics
-
MDAnalysis.auxiliary.__init__
-
MDAnalysis.auxiliary.base
-
MDAnalysis.auxiliary.core
-
MDAnalysis.auxiliary.EDR
-
MDAnalysis.auxiliary.XVG
-
MDAnalysis.converters
-
MDAnalysis.converters.base
-
MDAnalysis.converters.OpenMM
-
MDAnalysis.converters.OpenMMParser
-
MDAnalysis.converters.ParmEd
-
MDAnalysis.converters.ParmEdParser
-
MDAnalysis.converters.RDKit
-
MDAnalysis.converters.RDKitParser
-
MDAnalysis.coordinates.__init__
-
MDAnalysis.coordinates.base
-
MDAnalysis.coordinates.chain
-
MDAnalysis.coordinates.chemfiles
-
MDAnalysis.coordinates.core
-
MDAnalysis.coordinates.CRD
-
MDAnalysis.coordinates.DCD
-
MDAnalysis.coordinates.DLPoly
-
MDAnalysis.coordinates.DMS
-
MDAnalysis.coordinates.FHIAIMS
-
MDAnalysis.coordinates.GMS
-
MDAnalysis.coordinates.GRO
-
MDAnalysis.coordinates.GSD
-
MDAnalysis.coordinates.H5MD
-
MDAnalysis.coordinates.INPCRD
-
MDAnalysis.coordinates.LAMMPS
-
MDAnalysis.coordinates.memory
-
MDAnalysis.coordinates.MMTF
-
MDAnalysis.coordinates.MOL2
-
MDAnalysis.coordinates.NAMDBIN
-
MDAnalysis.coordinates.null
-
MDAnalysis.coordinates.PDB
-
MDAnalysis.coordinates.PDBQT
-
MDAnalysis.coordinates.PQR
-
MDAnalysis.coordinates.timestep
-
MDAnalysis.coordinates.TNG
-
MDAnalysis.coordinates.TRC
-
MDAnalysis.coordinates.TRJ
-
MDAnalysis.coordinates.TRR
-
MDAnalysis.coordinates.TRZ
-
MDAnalysis.coordinates.TXYZ
-
MDAnalysis.coordinates.XDR
-
MDAnalysis.coordinates.XTC
-
MDAnalysis.coordinates.XYZ
-
MDAnalysis.core.__init__
-
MDAnalysis.core.accessors
-
MDAnalysis.core.groups
-
MDAnalysis.core.selection
-
MDAnalysis.core.topology
-
MDAnalysis.core.topologyattrs
-
MDAnalysis.core.topologyobjects
-
MDAnalysis.core.universe
-
MDAnalysis.exceptions
-
MDAnalysis.lib
-
MDAnalysis.lib.c_distances
-
MDAnalysis.lib.c_distances_openmp
-
MDAnalysis.lib.correlations
-
MDAnalysis.lib.distances
-
MDAnalysis.lib.formats.libdcd
-
MDAnalysis.lib.formats.libmdaxdr
-
MDAnalysis.lib.log
-
MDAnalysis.lib.mdamath
-
MDAnalysis.lib.NeighborSearch
-
MDAnalysis.lib.nsgrid
-
MDAnalysis.lib.picklable_file_io
-
MDAnalysis.lib.pkdtree
-
MDAnalysis.lib.qcprot
-
MDAnalysis.lib.transformations
-
MDAnalysis.lib.util
-
MDAnalysis.selections.base
-
MDAnalysis.selections.charmm
-
MDAnalysis.selections.gromacs
-
MDAnalysis.selections.jmol
-
MDAnalysis.selections.pymol
-
MDAnalysis.selections.vmd
-
MDAnalysis.topology.__init__
-
MDAnalysis.topology.base
-
MDAnalysis.topology.core
-
MDAnalysis.topology.CRDParser
-
MDAnalysis.topology.DLPolyParser
-
MDAnalysis.topology.DMSParser
-
MDAnalysis.topology.ExtendedPDBParser
-
MDAnalysis.topology.FHIAIMSParser
-
MDAnalysis.topology.GMSParser
-
MDAnalysis.topology.GROParser
-
MDAnalysis.topology.GSDParser
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